Class DataFrameSnp

java.lang.Object
org.snpsift.annotate.mem.dataFrame.DataFrame
org.snpsift.annotate.mem.dataFrame.DataFrameSnp
All Implemented Interfaces:
Serializable

public class DataFrameSnp extends DataFrame
A set of DataColumns specific SNP 'alt' (e.g. Data for SNP "N -> A") A set of DataColumns, indexed by position. This is used to store data for a chromosome
See Also:
  • Constructor Details

  • Method Details

    • getAlt

      public String getAlt()
    • eq

      protected boolean eq(int idx, int pos, String ref, String alt)
      Does the entry at possition 'idx' match the given (pos, ref, alt) values?
      Overrides:
      eq in class DataFrame